PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G075100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 375aa    MW: 41753.7 Da    PI: 5.0849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G075100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12163214155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r++h  +Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  Aqcoe6G075100.1.p 163 QRMTHIVVERNRRKQMNEYLAVLRSLMPAS---YVQRSDQASIIGGAINFVKELE 214
                        79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.07E-17161229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.69E-12161218No hitNo description
PROSITE profilePS5088815.199162213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-10163214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-14163226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-9168219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MCIDREREEI ERGKEKEMAL ETVVYPNNLF SSYVCKDLYS LSSTSSVGVG NVGSVGGGGI  60
TSYDFALKEE EEQSGCCYDH EFDEFFGKNV SYQDLLFNNH LIPSFNLVQN VSECHTNSSD  120
GVCDESSLLN EEPLANTTST STNSRRKRRR TRINKNKEEV ENQRMTHIVV ERNRRKQMNE  180
YLAVLRSLMP ASYVQRSDQA SIIGGAINFV KELEQFLQSL EAQKQIKEQP EAATATTTTT  240
PFADFFAYPQ YSSSCNQNNN SSSNATKESM AENKSSIADI EVTMVESHAN LKILSKKRPK  300
QILKMVVGFQ NLHLSVLHLN VTTVEQLVLY SFSVKVEEDC QLKSVDGIAS AVHQMLQRIE  360
EEGVAAAATS AALS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145149RKRRR
2145150RKRRRT
3163174RMTHIVVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010266731.11e-127PREDICTED: transcription factor bHLH94-like
TrEMBLA0A0S3S5E11e-101A0A0S3S5E1_PHAAN; Uncharacterized protein
TrEMBLB9I7Y81e-101B9I7Y8_POPTR; Uncharacterized protein
STRINGPOPTR_0013s02680.11e-101(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-69bHLH family protein